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Options |
for advanced blasting |
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Genetic
codes |
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Choose
filter |
DUST with blastn, SEG with
others Using lower case filter |
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Reward |
for a nucleotide match
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Penalty |
for a nucleotide mismatch
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GI's |
Show GI's in
deflines Restrict search to list of GI's |
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Word Size |
balstn 11,
megablast 28, all others 3 |
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Threshold for
extending hits |
blastn or megablast 0, blastp 11, blastx 12, tblastn or tblastx 13
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Matrix |
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Search against
database |
Query strands to search against database( for
blast[nx], and tblastx ) |
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Gapped alignment
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Ungapped extension
Final alignment |
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Cost |
to
open a gap Cost to extend a gap |
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Alignment
view |
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